Lin, Jiahui

Member Profile

Email: linjh.link@zju.edu.cn

Education
Sept. 2022 – present, Zhejiang University, Ph.D. in Soil Science

Sept. 2018 – Jun. 2021, Zhejiang University, Master’s in Agricultural Resources and Environment (with coursework in Computer Science)

Sept. 2014 – Jun. 2018, Guilin University of Electronic Technology, B.S. in Biological Engineering

Work Experience
Zhejiang University Sept. 2021 – Jun. 2022, Research Assistant

Publications
• Lin, J., Dai, H., Yuan, J., Tang, C., Ma, B., Xu, J. Arsenic-induced enhancement of diazotrophic recruitment and nitrogen fixation in Pteris vittata rhizosphere. Nature Communications 15, 10003 (2024).

• Lin, J., Dai, Z., Lei, M., Qi, Q., Zhou, W., Ma LQ. et al. Arsenic modifies the microbial community assembly of soil-root habitats in Pteris vittata. ISME Communications ycae172 (2024).

• Lin, J., Huang, Y., Zhao, H. et al. Consistent responses of microbial C and N metabolic processes to elevated CO2 across global terrestrial ecosystems. Journal of Soils and Sediments 22, 403–408 (2022).

• Zhao, H., Lin, J., Wang, X., Shi, J., Dahlgren, RA., Xu, J. Dynamics of soil microbial N-cycling strategies in response to Cadmium stress. Environmental Science & Technology 55, 14305–14315 (2021)

• Wang, X., Lin, J., Peng, X., Zhao Y., Yu, H., Zhao, K. et al. Microbial rrn copy number is associated with soil C: N ratio and pH under long-term fertilization. Science of The Total Environment 954, 176675 (2024).

• Huang, Y., Lin, J., Tang, C., Xu, J. Organic carbon inputs shift the profiles of phosphorus cycling-related genes in maize rhizosphere. Plant and Soil 503, 595–609 (2024).

• Dai, Z., Guo, X., Lin, J., Wang, X., He, D., Zeng, R. et al. Metallic micronutrients are associated with the structure and function of the soil microbiome. Nature Communications 14, 8456 (2023).

• Wang, X., Dai Z., Lin, J., Zhao, H., Yu, H., Ma, B. et al. Heavy metal contamination collapses trophic interactions in the soil microbial food web via bottom-up regulation. Soil Biology and Biochemistry 184, 109058 (2023).

• Xu, H., Huang, Y., Xiong, X., Zhu, H., Lin, J., Shi, J. et al. Changes in soil Cd contents and microbial communities following Cd-containing straw return. Environmental Pollution 330, 121753 (2023).

• Liu, H., Hong, Z., Lin, J., Huang, D., Ma, LQ., Xu, J. et al. Bacterial coculture enhanced Cd sorption and As bioreduction in co-contaminated system. Journal of Hazardous Materials 444, 130376 (2023).

• Su, W., Yu, M., Lin, J., Tang, C., Xu, J. et al. Fire decreases gross mineralization rate but does not alter gross nitrification rate in boreal forest soils. Soil Biology and Biochemistry 175, 108838 (2022).

• He, L., Yu, Y., Lin, J., Hong, Z., Dai, Z., Liu, X. et al. Alkaline lignin does not immobilize cadmium in soils but decreases cadmium accumulation in the edible part of lettuce (Lactuca sativa L.). Environmental Pollution 310, 119879 (2022).

• Huang, X., Yang, X., Lin, J., Franks, AE., Chen, J., Zhu, Y. et al. Biochar alleviated the toxicity of atrazine to soybeans, as revealed by soil microbial community and the assembly process. Science of The Total Environment 834, 155261 (2022).

• Qi, Q., Hu, C., Lin, J., Wang, X., Tang, C., Dai, Z. et al. Contamination with multiple heavy metals decreases microbial diversity and favors generalists as the keystones in microbial occurrence networks. Environmental Pollution 306, 119406 (2022).

• Su, W., Tang, C., Lin, J., Yu, M., Dai, Z., Luo, Y. et al. Recovery patterns of soil bacterial and fungal communities in Chinese boreal forests along a fire chronosequence. Science of The Total Environment 805, 150372 (2022).

• Dai, Z., Lv, X., Ma, B., Chen, N., Chang, SX., Lin, J. et al. Concurrent and rapid recovery of bacteria and protist communities in Canadian boreal forest ecosystems following wildfire. Soil Biology and Biochemistry 163, 108452 (2021).

• Huang, Y., Dai, Z., Lin, J., Li, D., Ye, H., Dahlgren, RA. et al. Labile carbon facilitated phosphorus solubilization as regulated by bacterial and fungal communities in Zea mays. Soil Biology and Biochemistry 163, 108465 (2021).

• Huang, Y., Dai, Z., Lin, J., Qi, Q., Yu, L., Dahlgren, RA. et al. Contrasting effects of carbon source recalcitrance on soil phosphorus availability and communities of phosphorus solubilizing microorganisms. Journal of Environmental Management 298, 113426 (2021).

Software
nifH-Palmscan – [2024]
Developer: Jiahui Lin
Deblahion: nifH_palmscan is software designed to scan the palmprint of the nitrogenase iron protein (a segment with well-conserved catalytic motifs) from DNA/protein file.
Link: https://github.com/JaphethLin/nifH_palmscan

High-throughput sequencing data mining pipeline (yolo2) – [2021.3.8]
Developer: Jiahui Lin
Deblahion: An R package for end-to-end analysis of amplicons.
China Software Copyright Registration Number: 2021SR0447917

Research Experience
2022.1 - 2024.3 Assembly of the plant rhizosphere microbiome and mechanisms of plant-microbiome interactions

2024.3 - present Evolution and adaptability of planetary biological nitrogen fixation systems

Skill
Subjects: Biology (Courses Taken: Biochemistry, cell biology, molecular biology, etc), Computer Science (Courses Taken:
Data structures and algorithms, Image information processing, Machine learning, Object oriented programming, etc).

Language: R, Python, C, C++.

Techniques: Prokaryotic isolation and culture, Mass spectrometry, Metagenomics/metatranblahomics, Metametabolomics, Adobe Illustrator, ChemDraw, etc.